Introduction | Toy example
Package: nimbleAPT 1.0.7
nimbleAPT: Adaptive Parallel Tempering for 'NIMBLE'
Functions for adaptive parallel tempering (APT) with NIMBLE models. Adapted from 'Lacki' & 'Miasojedow' (2016) <doi:10.1007/s11222-015-9579-0> and 'Miasojedow, Moulines and Vihola' (2013) <doi:10.1080/10618600.2013.778779>.
Authors:
nimbleAPT_1.0.7.tar.gz
nimbleAPT_1.0.7.zip(r-4.7-any)nimbleAPT_1.0.7.zip(r-4.6-any)nimbleAPT_1.0.7.zip(r-4.5-any)
nimbleAPT_1.0.7.tgz(r-4.6-any)nimbleAPT_1.0.7.tgz(r-4.5-any)
nimbleAPT_1.0.7.tar.gz(r-4.7-any)nimbleAPT_1.0.7.tar.gz(r-4.6-any)
nimbleAPT_1.0.7.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
nimbleAPT/json (API)
| # Install 'nimbleAPT' in R: |
| install.packages('nimbleAPT', repos = c('https://drjp.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/drjp/nimbleapt/issues
Last updated from:2e6b86aedc. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 134 | ||
| source / vignettes | OK | 243 | ||
| linux-release | OK | 125 | ||
| macos-release | OK | 133 | ||
| macos-oldrel | OK | 108 | ||
| windows-devel | OK | 100 | ||
| windows-release | OK | 97 | ||
| windows-oldrel | OK | 102 | ||
| wasm-release | OK | 117 |
Exports:buildAPTplotTempTrajsampler_APTsampler_RW_block_temperedsampler_RW_multinomial_temperedsampler_RW_temperedsampler_slice_tempered
Dependencies:clicodacpp11glueigraphlatticelifecyclemagrittrMatrixnimblenumDerivpkgconfigpracmaR6rlangvctrs
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Create an APT function, from an MCMCconf object | buildAPT |
| nimbleAPT | nimbleAPT |
| plot.tempTraj | plotTempTraj |
| A virtual function to use as a contains argument when writing APT samplers | sampler samplers sampler_APT sampler_RW_block_tempered sampler_RW_multinomial_tempered sampler_RW_tempered sampler_slice_tempered |